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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919748.1_cds_XP_016468939.1_61526
CDS Infomation

[gene=LOC107791391] [db_xref=GeneID:107791391] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X2] [protein_id=XP_016468939.1] [location=complement(join(40614..41500,41580..41933,42020..42055,60463..61288))] [gbkey=CDS]
Sequence

ATGGAAGGCCTTCTCTCCTTTCAATTTCTAGCTTACACGCTACTCTTATTCTTAATTCAT
CTTCCTCCTCTTTCTTCCCTAGAAAACCAGTGGTTTGCCAGCTGCGGCAAATCCTTCCAC
TGTGGAAACTTAGCTGGGATTAGTTACCCTTTCTGGGGAAATGACCGACCAAAGGAATGT
GGTTATCCTGGATTCGAGCTTCAATGTGAAGATCAAGGTAGCACCATAATACAAATTTCA
AACGTAAATTACTTAGTTCTCGATATTAAAATGGACGCCCAAATTATAACAGTTACTAGA
AAAGATGTAGCAGAAGGGATTTGTCAATTTAACACGACAATGGATTCCAATATATTTGAG
TATGCTTTGAGCTTAGTGAATGTCACGGTTAATTACGTGTGTCCCCCTTGGACCGGAAAT
ACTGGAATTGCACCTTCGGCTGGGTCGTTTAATTGTGCGATAAACGGATTGAGTTATAAG
AATGATTTGAACGGAGTTGGAACATGTCATGCTAATATAGTTGTACCAGCTCGTAAGGAG
TACTATTCGTCTGGAGGAATAATTGGAAATTTGGGGGATTTGAAGAAGTTGCTGGAACAG
GGGTTTGATTTGAAATGGAAAGTGGATAGCAGTCCTTGTAAGGAGTGTGAAAAGTTTGGG
GGAAGTTGTGGATTTGATGCTGGTGCGAAACAGTTCACTTGTTTATGCCCTGATCATCAA
TCTTCTTCTTCGTTAAACGCGTGCACCACCGGAATTCCTGCAGCTGGTTCAGGTTCCCCT
GGAGCTGGAAAAAGTAGTCCGCTTTCATCCCTTGCTACACCGTCGGATAGTGGAAAGAAA
AATCAGACGCCACTTGCAATAGGCCTTAGCGTAGGAGGTGCTGTATTTGCCGGTATTGGC
ATTGGATGGCTAATCTTCTTCTGCAAACAAAAGAGAAAGCGGACTGCAGCACAGACTTCA
CCTGTCCAAACTGAAAAGAAAGACCTTCCAATTTTAAGCTCAAGCAATGGCCTGACTACT
TCTTCTCCTAATTCTTCAACCACTTTCACCAGAAGCATTCCCTCTTATCCCTCGTCCACA
TCTGAAGCTGATTATGGGAGGGGAAGCTCCTATTTTGGGGCTCATGTCTTCAGTTTTGCT
GAACTTGAAGAAGCCACGGATAATTTTGATCAATCTAAAGAACTCGGGGATGGTGGTTTT
GGCGTCGTGTACTATGGCAAGCTTCGTGATGGTCGTGTTGTAGCAGTCAAGCGCTTGTAT
GAGAACAATTTCAAGCGTGTAGAGCAGTTCATGAATGAAGTTGAGATTTTAACTAAGCTC
CGCCACCAGCACCTAGTGACATTATACGGTTGCACATCAAAACGAAGCCGAGATTTACTG
CTTGTTTATGAGTACATATCAAACGGGACAGTGGCAGATCATCTGCATGGAAATCGGGCC
AAATCTGGTTTACTCTCTTGGCCTGTCCGAATGAACATAGCCATTGAGACTGCTGATGCA
CTGGCTTATCTCCATTCCTCAGTTATAATACACCGTGATGTCAAAACCAACAACATTCTA
TTAGACAATGATTTCCATGTGAAAGTTGCTGATTTTGGGCTATCAAGATTGTTCCCAAAT
AATGTCACACATGTCTCTACTGCTCCACAGGGTACACCCGGCTACGTTGATCCTGAGTAC
TACCAATGTTACCAGCTCACTGAAAAGAGTGATGTTTATAGTTTTGGGGTGGTCTTGATA
GAGCTGATCTCATCATTAGAAGCTGTGGACACCAACAGGCACCGCCAAGATATTAATTTG
GCTAATATGGCTGTCAACAAGATCCAAACTCATTCAGTACATGAATTAGTTGATCCAAGT
CTTGGATTCACGACAAACAGCTCTGTGAGGAGGATGACTACCTTAGTCGCTGAGTTAGCT
TTTCGTTGTCTGCAACAGGAGAGAGATATGAGACCTTCAATGCAAGAAGTGCTGGAGACT
TTGAGAGGCATCCAGAGTGGGGAGTCGAATGCACACAAGGCGGAGGTACTCGACATTGTG
GTAGATGATGTTGGACTCCTCAAGGGCTCGGGCTCCCCTTCCTCACCACATTCCAGTGGA
TGA

Peptide Sequence

PEP ID

XP_016468939.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X2 [Nicotiana tabacum]
Sequence

MEGLLSFQFLAYTLLLFLIHLPPLSSLENQWFASCGKSFHCGNLAGISYPFWGNDRPKEC
GYPGFELQCEDQGSTIIQISNVNYLVLDIKMDAQIITVTRKDVAEGICQFNTTMDSNIFE
YALSLVNVTVNYVCPPWTGNTGIAPSAGSFNCAINGLSYKNDLNGVGTCHANIVVPARKE
YYSSGGIIGNLGDLKKLLEQGFDLKWKVDSSPCKECEKFGGSCGFDAGAKQFTCLCPDHQ
SSSSLNACTTGIPAAGSGSPGAGKSSPLSSLATPSDSGKKNQTPLAIGLSVGGAVFAGIG
IGWLIFFCKQKRKRTAAQTSPVQTEKKDLPILSSSNGLTTSSPNSSTTFTRSIPSYPSST
SEADYGRGSSYFGAHVFSFAELEEATDNFDQSKELGDGGFGVVYYGKLRDGRVVAVKRLY
ENNFKRVEQFMNEVEILTKLRHQHLVTLYGCTSKRSRDLLLVYEYISNGTVADHLHGNRA
KSGLLSWPVRMNIAIETADALAYLHSSVIIHRDVKTNNILLDNDFHVKVADFGLSRLFPN
NVTHVSTAPQGTPGYVDPEYYQCYQLTEKSDVYSFGVVLIELISSLEAVDTNRHRQDINL
ANMAVNKIQTHSVHELVDPSLGFTTNSSVRRMTTLVAELAFRCLQQERDMRPSMQEVLET
LRGIQSGESNAHKAEVLDIVVDDVGLLKGSGSPSSPHSSG

Transcript Sequence

Gene sequence data has not been registered.